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Piper Sandler 35th Annual Healthcare Conference

Nov 30, 2023

Moderator

Morning, everyone, and thank you for joining our third day at our Piper Sandler Healthcare Conference. Really excited to be featuring the team from aTyr Pharma. We have a great discussion over the next 25 minutes, and just want to say thank you for being part of our conference. Lots to discuss. I figured I'd split the discussion into both of the assets and both of the studies ongoing. Start with EFZO-FIT and then go into EFZO-CONNECT. I guess a good place to start would be, you know, for investors who are new to the story or getting re-familiarized, maybe describe briefly how does efzofitimod MOA and value proposition compare to other immunomodulators that are currently in development? And, and, if you could talk about that, it's the opportunity in sarcoidosis and why it's important.

Sanjay Shukla
President & CEO, aTyr Pharma

Sure. You know, the company was really founded around a new, or describe it as an underground area of immunobiology.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I think we are fulfilling the mission of Dr. Schimmel, who discovered these-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

synthetase fragments and how they can modulate local immune environments.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

It's really, right off the bat, very differentiated-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... from a small molecule or a monoclonal antibody, and I think we are now harnessing the advantages-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... of this new physiology that comes from all of our bodies.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Are finding now ways to retune the immune system.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

And I'll be the first to say, I was, you know, very skeptical -- even when I joined aTyr, 'cause this sounded a lot more like-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... science fiction. But the clinical data that we've produced is undeniable-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... and the experts have said they've waited decades-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... to kind of see not only the ability to modulate immune cells-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... but do so in a safe fashion-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... in a way that does not create more immune suppression-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... or infection risk.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I do think that we are a new class of immunobiology.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

The drug has direct effects on tuning macrophages.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We can see morphological change.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... of these macrophages that shift to much more of a resolution phenotype.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

It's really quite exciting days for us at aTyr to be able to finally, I'd say, leverage-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... and tap into the science, and retune the immune system at the local level.

Moderator

Okay, that's wonderful. Would love to kind of dig into the study that, the pivotal study that you have ongoing. As I said, as you know, fully in enrollment year of 85 sites, you guys have continued to say you're on track, for data for enrollment completion in early 2Q 2024. So that's not really that far from now. I guess, where are you with site activation? Could you maybe quantify sort of, the likelihood of really maintaining this timeline? In... You know, we assume that you are quite far along in the process, that you're staying with guidance, but if you could just kind of-

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah

Moderator

... quantify how things are going and the enthusiasm that exists.

Sanjay Shukla
President & CEO, aTyr Pharma

Right. So we did wait a bit-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... until we had, I would say, a full, gamut of sites up and, you know, 80, 85-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... sites, and I'd say the last couple sites now coming online, primarily those sites that we brought on following American Thoracic Society.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We had some interest, in particular with Brazil.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We had a number of countries interested, Turkey, India, Brazil.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We kind of looked at things and said: Where can we get activated within 3-6 months?

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... with the regulatory environment? And these are probably the last sites-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... coming on board. We have locked in on guidance for Q2.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We feel really confident based on the current rate of enrollment-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... and then these last couple sites joining, that we'll be able to meet those timelines. I've always wanted to try to get the data out at American Thoracic Society-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... in 2025.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

That's a main meeting. That would be a spot landing.

Moderator

Okay.

Sanjay Shukla
President & CEO, aTyr Pharma

You know, we're lucky. I know a lot of companies are having 6-9-month delays-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... with enrollment. The enthusiasm on our phase II data-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... has really helped us.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

And then the new insights around mechanism have also brought even more people, more interest. And then just like anything else, once you start to enroll those-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... first couple patients and a site sees how they do-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... they may be happy with the results-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... and then they talk to other patients about getting involved.

Moderator

Great.

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah.

Moderator

You also noted that there are five or six sites in Brazil that are gonna be added. Given that, what was the rationale for expanding into Brazil, and how many patients do you hope to get into that study?

Sanjay Shukla
President & CEO, aTyr Pharma

Lots of inbound interest.

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... American Thoracic Society. Dan Culver gave a kind of a standing, sitting only-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... symposia. There were people sitting on the floor.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

A lot of countries, as I said, leaders-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... came to us. We made the decision in Brazil because we felt like we could get a-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... quick, quick regulatory approval. We've done that.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I would expect to see a patient, first patient dose next week.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Brazil is one of those places where we also had good line of sight with our CRO-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... and some of the operational-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... team there. You know, this can obviously help us-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... meet our goals of Q2.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We could see upwards to, you know, 20 patients enrolled there, but it's competitive enrollment.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

Everybody's kind of moving. This was a good place for us to allow patients-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... there are a lot of steroid-dependent patients in Brazil. It's a good place for us to look at. And I, unfortunately, have to tell, like, folks in India that-

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

It's just gonna take too long.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

To get started. Yeah.

Moderator

Thank you for sharing that. Given that broad accessibility or sites across the globe, is there any heterogeneity when it comes to steroid tapering when you go from one region to another? What data supports that there shouldn't be any confounding geographical differences in steroid tapering, if that definitely influences the primary endpoint?

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah, I would say in Europe in general-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-they tend to overdose their patients-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

less than maybe here in the U.S.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

But there's also the fact that you'll have a greater proportion of Black patients here-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

in the U.S., and the Black community typically has, in particular African American women, more severe-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

sarcoidosis that requires a bit more.

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-steroid control.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

that also comes with the unfortunate toxicity that-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

You know, 15 milligrams might be there. But I think what we've observed is Europe tends to be a little bit more-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... judicious, but nothing to the degree-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

—in this cohort of 7.5-25, they're all kind of the same kind of disease.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I don't expect to have really too many people at 25-

Moderator

Okay

Sanjay Shukla
President & CEO, aTyr Pharma

or 20, anyway. Last trial, everyone was kind of in that 11-13 range.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We'll be in that sort of 10-13 range-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-10-12 range here, given that we brought in Japan and Europe.

Moderator

Mm-hmm. That's helpful. The other question that has come up, and it comes up quite a bit, is sort of the reasons for going for steroid tapering as the primary endpoint. So maybe talk about, A, simple one, you know, without going into history, is it signed off by the FDA as the approvable endpoint? And, B, why did you guys want to do that to be a key endpoint in this study?

Sanjay Shukla
President & CEO, aTyr Pharma

Right. Right. And just to be clear, I mean, if any biotech CEO says the FDA signed off on it-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... like, that's never true.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

So they tell you what they don't like-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

and you have to basically

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

Figure out what you, what they might like. What I can tell you is we went in with FVC as a primary.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

There was clear guidance that FVC, while important in this population, unlike IPF, it should-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

not be a primary endpoint.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Now, the good thing is we had good results with steroid reduction and the PRO instrument in the last trial.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We had a good debate around-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

what should be the primary there. Steroid reduction was landed upon because we felt as though this is the best feel and function -

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-type endpoint. It's tied to how you feel-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

and also how you were doing functionally.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

Feel and function is how you get drugs approved.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

The feel part of the PRO, even though we had some real substantial benefit-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... we also felt like there was a lot of risk to make that the primary.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

No drug's been approved just on a PRO, even though that division wants-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-a drug approved there. Nonetheless, we have a nice endpoint mix steroid reduction. If you look at ankylosing spondylitis or eosinophilic asthma, there have been-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

approvals based on steroid reduction. And I think, it's we've landed on that endpoint as a good, solid primary endpoint.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We know from the experts and the patients, they want-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

a steroid-reducing and maybe even a steroid-sparing

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

type therapy, and we have a shot to produce

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

You know, those kinds of data in our trial.

Moderator

That's very helpful.

Sanjay Shukla
President & CEO, aTyr Pharma

I'll also add one other thing. Not just the FDA, every region-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

regulator we spoke to, EU, Japan, they all aligned.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

Very quickly around this. So there was not discordance around steroid reduction. It was viewed as a really nice endpoint.

Moderator

Mm-hmm. That's helpful. I think, another area that comes up quite a bit is, you know, the steroid tapering period in the phase I and II was eight weeks, now you're going on to 12 weeks. How do you expect that additional four-week time point to really impact the results?

Sanjay Shukla
President & CEO, aTyr Pharma

We needed to give a little bit more time-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-for two reasons. Number one, our basement dose-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

in last trial was we were trying to taper to five, we're now trying to taper to zero.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We've got to allow a little bit more time for the clinicians and patients to absorb that taper. But the other thing, it's a longer- trial.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

So a 12-week taper allows us to perhaps, you know, enroll a little bit-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-better in a more stable manner, and we've now got 36 weeks-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-on the post-taper period, as opposed to the last trial, which had 16 weeks.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

So it was a good trade-off, mainly to allow for a more sort of reasonable schedule of taper-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-to get from, like, say, 20 milligrams to zero-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

in eight weeks can be a little tough on the patient.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah.

Moderator

That's helpful. The other question is, I think the primary endpoint is powered for 90%, accounts for a 10% dropout. Do you get notified of discontinuation rates or dropouts? How do you feel, as you know, you're at a pretty good state in terms of enrollment? Like, is the numbers sort of aligned with your assumptions? Is it lower, higher? Anything you can-

Sanjay Shukla
President & CEO, aTyr Pharma

I mean, all I can say is at this point.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... you know, the D.C. rate is better, less than we expected.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

You know, we have a lot of safeguards.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

And we want patients to-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

remain in the trial, so you know, they can get more steroids.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

If people have truly worsening.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... sarcoidosis-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

It affects another organ system-

Moderator

Mm

Sanjay Shukla
President & CEO, aTyr Pharma

... they may need to then have to get on something like infliximab-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-or something more heavy-handed. But thus far, the trends are good. This might even impact our final number in the sense that if we don't have that-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

that much dropout, we could potentially be done, you know, sooner than-

Moderator

Okay

Sanjay Shukla
President & CEO, aTyr Pharma

... hitting $2.64. But right now, trending, I would say, in the positive direction with some buffer.

Moderator

Okay.

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah.

Moderator

So assuming you have said, you know, like, let's say enrollment completion, of course, in 2Q 2024, you could have data in 2Q 2025 around ATS. I know there's quite a bit of time between now and then, but I think, what is the data that you're going to have at the top line? And then secondly, which I think a lot of people will ask once enrollment is completed: What do you need to achieve as a bar for success to being eligible for sort of, filing for approvability, for approval?

Sanjay Shukla
President & CEO, aTyr Pharma

Well, clearly we have to hit steroid reduction.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

We're essentially trying to show, under the assumption that, let's say everyone came in at 10 milligrams-

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We're powered to show about a, you know, 3-4 milligram-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-difference. One would say: How did you come up with that?

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

Last trial, we saw a 20-25% reduction in six months. This trial is a longer trial, but we're also forcing people to zero.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

We think that's a reasonable number. 50% was bandied about-

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

but the FDA itself said

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

Well, there's no threshold here. And some experts say even 1 or 2 milligrams.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

Less a day would be useful. We got to hit steroid reduction. I think the drug also had such substantial improvement with quality of life.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We expect to see that again. FVC is the one variable that-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-I think, as long as we maintain FVC-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

and don't worsen, I think it's an approvable drug. Certainly, if we improve FVC

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

It's, it's a slam dunk.

Moderator

Could you maybe talk about the hierarchy of the secondaries, which one you need to sort of?

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah.

Moderator

Got it.

Sanjay Shukla
President & CEO, aTyr Pharma

Steroid reduction is the primary, and then the next hierarchical analysis-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

is looking at FVC.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

You know, I just talked to an investor where, you know, we get free looks on non-inferiority.

Moderator

Okay.

Sanjay Shukla
President & CEO, aTyr Pharma

But we'll look at superiority in a second.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

And then we'll do quality of life. Same thing with the KSQ-Lung, trying to demonstrate superiority there.

Moderator

Is there a scenario by which you miss on your primary, but you hit all of your key secondaries that could still justify a path forward?

Sanjay Shukla
President & CEO, aTyr Pharma

I'm not sure about that.

Moderator

Okay.

Sanjay Shukla
President & CEO, aTyr Pharma

I think steroid reduction, we feel really good about.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

I think the way the drug works, it's already been described-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

as a safer steroid-like

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-therapy. Patients are going to require some sort of immune-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-suppressive agent when you have sarcoidosis-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

because of risk to other organ damage.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

You're going to have to get something to control the immune system.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

I think by doing so with a safer steroid alternative or reducing steroids-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

That's the first step to kind of-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

I think, really getting an approved therapy. We know it's sitting there in the treatment guidelines, that we're looking for something better. I think we need to show that. Yeah.

Moderator

Then for investors who are new to the aTyr story and or who are looking at sarcoidosis, they may notice that that there's a very limited number of compounds or none in late-stage development. They may also recognize the history of sarcoidosis has been challenging in terms of development. So maybe just talk to us like, what led you to pick this indication, which has historically been challenging to really move forward with, and really give you strong conviction for a high POS and for into the phase III study readout?

Sanjay Shukla
President & CEO, aTyr Pharma

Well, we had a lot of translational data-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

early on that showed in a number of lung injury models

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

You know, pick the one you like.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

The drug had very consistent anti-inflammatory effects. Secondly, the drug is built around a synthetase fragment-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

that's enriched in the lungs.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Thirdly, we discovered neuropilin was-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

the receptor that this drug binds

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-to. Neuropilin is highly expressed on myeloid cells-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

in particular in the lung. So all of that gave us confidence to move into sarc.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Yes, sarc is a rare disease where people have not really paid attention to it.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Huge unmet need in our mind.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Talking about 200,000 patients in the U.S. having to rely on-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

on steroids before they just become fibrotic.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

That's not really fair to these patients.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I think, you know, our view was it's a green space opportunity.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

You're seeing people now follow us-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

and join the space. It's not the easiest indication.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

But we have really become experts, and this is the first phase III ever in sarcoidosis.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

I think it's a real monumental achievement just to even get to this stage.

Moderator

Thank you for sharing that. You guys have been very prolific in sharing continuous data sets at many medical meetings. Is there any data sets that could be really informative, that could further increase POS of success, that you're hoping to share at other upcoming meetings in the next, in 2024? And if you could just briefly talk about those.

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah, I mean-

Moderator

That'd be helpful.

Sanjay Shukla
President & CEO, aTyr Pharma

... we are one of the most published companies-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-out there. We continue to give all investors-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

more and more data.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

To de-risk things. We had a recent exposure-response data set that we published in Frontiers in Pharmacology.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

So all the biotech companies here-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-that say they have dose response, ask them: Can you do an exposure response analysis, and can you publish that?

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I think we might be the only one in phase III. That's the kind of stuff I learned-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

working at Roche in Nutley 20 years ago. That is the kind of data-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

-and that's the kind of data-driven company we are. When you think about what's coming-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

In the future, we had some great mechanistic data.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

around macrophage biology.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I might expect to see a publication next year around that ahead of our hopeful-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-product launch. The clinicians now really understanding this is how the drug works.

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

because they've had to learn about synthetase biology.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

It's not in any textbook.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I think we're filling in gaps of knowledge-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

that we hope really becomes a new paradigm shift in how you treat inflammatory disease.

Moderator

Great. Thank you. Maybe in the next six minutes, would love to transition to EFZO-CONNECT. I guess the question is, you recently initiated the study in SSc-ILD, and it's in 25 patients. So at what junction do you feel like you should you could give us an update how enrollment is going, and when you could actually have your first data?

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah, I'd like to. I always like to see kind of how the trial-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

-progresses, how we get the sites up and running. You know, we'll probably have half a dozen sites up here-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

Pretty soon. And then I'd like to see, you know, what's the enrollment rate?

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

How are things progressing? It's a smaller trial. It's U.S. only. There's frankly been a lot of excitement to get started on that trial-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... because of the sarc data.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

A lot of the pulmonologists down the hall wanted to get involved. I also think finding neuropilin expression in the scleroderma plaques has a lot of the rheumatologists-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... interested because no therapy has improved quality of life for these patients. So, you know, I hope to probably in the spring, give a little bit of a better update here. This is a phase II trial that I'd like to have some data. I always like to be around medical conferences.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

ACR is in November. If you had to pin me down right now, I'd like to have some-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... some kind of data there. I don't know if it's going to be a complete data set-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... interim.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

I've got some more levers with that trial, looking at skin and lung.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Skin is an earlier look.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

It's a three-month biopsy.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We may see some skin changes. I'd say stay tuned to see. Let's see how things go, and then I'll be able to guide a little-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... bit more tightly.

Moderator

Is there—Let's say you do provide an interim look in the second half of 2024. Obviously, that would be maybe two quarters ahead of sarcoidosis. Is there any translation that one could infer from going from SSc-ILD to the sarcoidosis population?

Sanjay Shukla
President & CEO, aTyr Pharma

Let's understand, scleroderma will be much more fibrotic-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... tougher, harder disease-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... in some ways, but a more validated FVC endpoint there.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

In my mind, I think our drug is a lung-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... you know, immunomodulator. So I'd like to see some improvement with FVC there.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We're going to get some more information on how much this could be useful in a more fibrotic phenotype.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

You know, this is definitely an experiment to look at some things there.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Why I like this and it's de-risked, is we see a lot of neuropilin expression-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... right there at the skin level.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

So that gives us some upside there. I'd like, I mean, I'd like to see some encouraging signals-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... with the skin, with the lung. If we see improvement with skin-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... we would be the first therapy to ever show that. And then I think it opens up the systemic, just the non-ILD-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... side of the fence, and a lot of the rheumatologists are really curious to try the drug even in that population.

Moderator

You alluded to seeing some positive signals in FVC and even in the skin fibrosis. Given the small size of the study, like, could you maybe help us fine-tune? Like, what would be a magnitude that you would consider sort of, "Yes, this is the treatment effect we're seeing, we will move forward into a larger pivotal study?

Sanjay Shukla
President & CEO, aTyr Pharma

Tocilizumab was, for example-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... approved with about a 5%-6%-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... improvement over the course of a year in FVC. So it's a six-month trial.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

Like, I want to be at least half of that, 2.5%-3%.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

What I like in the sarc data, we showed about a 3.3% improvement-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... with the high dose in just six months. We can replicate that-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... in the scleroderma population.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

That's a really good-

Moderator

Okay

Sanjay Shukla
President & CEO, aTyr Pharma

... kind of bar.

Moderator

Okay.

Sanjay Shukla
President & CEO, aTyr Pharma

Yeah.

Moderator

How soon could you, I guess, could you engage with the FDA with the interim data next, or would you want to, I guess, wait for the, for the full results?

Sanjay Shukla
President & CEO, aTyr Pharma

I'd say right now, let's track to the full results.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I mean, there's ability to maybe make this-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... adaptive at that point.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

You know, I think it's a bad disease with drugs that we need-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

B etter drugs than tocilizumab and etanercept.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

I think they were approved kind of a little bit-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... sort of as a throw-in.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

I mean, Toci, they weren't going to approve it-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... and then the FDA asked Roche-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... to submit on that. I think we could have a good dialogue.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We have a Fast Track designation for EFZO for both indications.

Moderator

Mm-hmm.

Sanjay Shukla
President & CEO, aTyr Pharma

We continue to keep in touch with the agency. They want to know our plans for other ILDs.

Moderator

Mm-hmm. Perfect. That's great. I think we, I guess the... Are you thinking at this junction, the focus of the company is really execution across these studies, or given the mechanism, there's a lot of other pipeline expansion opportunities, and-

Sanjay Shukla
President & CEO, aTyr Pharma

We-

Moderator

... is that a strategy moving forward in 2024, or?

Sanjay Shukla
President & CEO, aTyr Pharma

We're doing that in the background.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

I have some big shareholders in the audience. They want me focused on sarcoidosis-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... and get the readouts there.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

That's where I'm keeping focus.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

But I'm really encouraged with our pipeline.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

We're seeing other synthetase fragments binding things-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... like TGF-beta family-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... LTBP1, we see FGFR4 with another. Why are these fragments binding these other-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... cell surface proteins on other?

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

That just tells us that we're validating-

Moderator

Mm

Sanjay Shukla
President & CEO, aTyr Pharma

... that this is a real underground system.

Moderator

Yeah.

Sanjay Shukla
President & CEO, aTyr Pharma

We don't play that up a whole lot-

Moderator

Yeah

Sanjay Shukla
President & CEO, aTyr Pharma

... publicly, but, I do think that this is a, you know, we are a platform-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... company, a truly platform biology company, but we're keeping our eyes on the ball-

Moderator

Mm-hmm

Sanjay Shukla
President & CEO, aTyr Pharma

... with regards to the phase III trial. That's really where investors really are paying attention.

Moderator

Well, that's great. I think we had a really wonderful and productive discussion over the last 25 minutes. Just want to say thank you so much for being part of our conference, and really excited for 2024. Let's say thanks to the team.

Sanjay Shukla
President & CEO, aTyr Pharma

Thank you.

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