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Study Result

Nov 10, 2025

Operator

Morning, and welcome to Cogent Biosciences webcast. I will now turn the call over to Christi Waarich, Senior Director of Investor Relations.

Christi Waarich
Senior Director of Investor Relations, Cogent Biosciences

Thank you, Operator. Today's call will review the positive results from our Phase III PEAK trial in GIST. These results were shared in a press release earlier this morning. You can find the press release in the Investors and Media section of our website at cogentbio.com. Before we get started, please be reminded that remarks made during this webcast may be forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995. These may include statements about our planned regulatory submissions and timelines, future presentations of clinical data, and financial projections. Please refer to our most recent filings with the Securities and Exchange Commission for a full discussion of risks and uncertainties associated with our business. With that, it's my pleasure to turn the call over to Andrew Robbins, President and Chief Executive Officer. Andy?

Andrew Robbins
President and CEO, Cogent Biosciences

Thanks, Christi, and good morning, everyone. As I'm sure many of you have already read this morning in our press release, today is a historic day for Cogent Biosciences and, more importantly, for patients fighting GIST around the world. After analyzing the results from our PEAK Phase III trial of bezuclastinib in combination with sunitinib, I am very pleased to share that the results show a clear, dramatic, statistically significant advantage over sunitinib alone in patients fighting imatinib-resistant or intolerant GIST, as measured on our primary endpoint, progression-free survival. With a 16.5-month median PFS, a 46% objective response rate, and a hazard ratio that shows a 50% reduction in the risk of progression or death for these patients, the profile generated by the bezuclastinib combination has positioned it to rapidly become the standard of care for second-line GIST patients.

Taken together with the results previously reported from the SUMMIT trial of bezuclastinib in non-advanced systemic mastocytosis patients, bezuclastinib has emerged as the best-in-class selective KIT mutant inhibitor in a $7.5 billion global market, with a path toward approval in both patient populations by the end of 2026. Now, here on slide 3, I'm very happy to introduce both Dr. Jessica Sachs, Cogent's Chief Medical Officer, and Dr. Neeta Somaiah, our special guest today, who is the Department Chair of Sarcoma Medical Oncology at the MD Anderson Cancer Center and a key investigator on the PEAK trial. Dr. Somaiah will take us through the results of the PEAK trial and join us for Q&A at the end of the call. Before we get to the PEAK results, here on slide 4, I would like to remind us all of the current treatment landscape for patients with imatinib-resistant GIST.

While imatinib demonstrates very impressive durable responses in the majority of first-line patients, the current treatment options for patients who develop resistance to imatinib have demonstrated much more modest clinical activity. There are currently three FDA-approved products for the treatment of refractory GIST, including sunitinib, regorafenib, and ripretinib. Each of these products garnered an approval based on a pivotal trial which demonstrated median progression-free survival of 5-6 months and drove responses in less than 10% of patients on those trials. Sunitinib was originally approved for second-line GIST in January of 2006 and has remained the standard of care around the world in this patient population for the past 20 years. With advances in quality of care, it is now generally associated with an 8-month median progression-free survival and an expectation of approximately 20% of patients demonstrating evidence of response.

Keeping this current treatment landscape in mind, I'd now like to invite Dr. Somaiah to provide us with some background on this disease, as well as describe the PEAK trial and the exciting results we have to share today. Dr. Somaiah?

Neeta Somaiah
Department Chair of Sarcoma Medical Oncology, MD Anderson Cancer Center

Hey, good morning, everybody. It is my absolute pleasure to be walking through the next couple of slides about the GIST overview and the top-line results. Moving on to slide number 6. You know, gastrointestinal stromal tumor is a rare disease, but it is a common sarcoma that I see a lot of, more than 6,000 new cases diagnosed annually in the United States. Over 80% of GIST tumors express KIT mutations, which is typically in exons 11 and 9. They can occur anywhere all along the GI tract, from the base of the esophagus all the way to the rectum, but the majority of these tumors arise in the stomach and, following that, in the small intestine.

While imatinib, as Andy has said, provides disease control in the front-line setting for the majority of patients, at least 60% of patients with advanced GIST will develop resistance within two years. This is primarily due to mutations in the ATP binding site of exon 13 and 14, or, as we call it, the activation loop, which is exon 17, 18. As you have seen, while there are additional FDA-approved sequential lines of therapy that include sunitinib, regorafenib, and ripretinib, they are effective only in a subset of patients, and this is because their activity is limited to a subset of the resistance mutations that we see and, eventually, disease progression results because of clonal heterogeneity. Next slide.

This is the key slide that talks to that excites us as investigators because there is a great rationale for combining bezuclastinib and sunitinib. As you see here, no single TKI inhibits all the KIT mutations when we look at imatinib, regorafenib, IDRX-42, ripretinib, and sunitinib. They have activity against the primary mutations, exon 9 and 11, but when you look at the slew of secondary mutations that can arise, we have Regorafenib, Ripretinib are skewed more towards the activation loop activity, including IDRX-42, and sunitinib is the only drug that we have that has strong activity against the ATP binding pocket, especially exon 13. When we combine bezuclastinib, and bezuclastinib has more focused, targeted activity on the activation loop, exon 17, and beyond mutation. When we combine both of them, you do have a broad inhibition that covers the full spectrum of secondary mutations.

Next slide. Moving on to the trial design of the Phase III portion of the PEAK Study, patients were randomized 1:1 to receive either bezuclastinib 600 mg once daily, along with sunitinib 37.5 mg once daily, and there were 204 patients on that arm, and sunitinib alone, 37.5 mg once daily, and there were 209 patients randomized to that arm. Crossover was allowed following blinded independent central review confirming progression of disease. It was a very, actually, it was a great design. It was a simple-to-accrue-to study, hence the accrual did proceed fairly quick. The key patient eligibility included age greater than 18 years. Patients needed to have locally advanced, unresectable, or metastatic GIST, but at least one measurable lesion for RECIST 1.1.

They had to have documented disease progression prior to entry or documented intolerance to imatinib, which is rare, but we do see that a couple of times. The primary endpoint was progression-free survival per blinded independent central review. The key secondary endpoints were objective response rates per BICR, overall survival, and other secondary endpoints included progression-free survival per the investigator assessment, disease control rate, time to response, and duration of response. Moving on to the next slide, slide 9. Here, we can see the part 2, which is the Phase III portion of the PEAK study, the population that was represented in this part. When you look at patient demographics, when looking at the sex, male versus female, median age, and the ECOG performance status across the two arms was fairly balanced, slight male predominance.

The median age was around 63, 64, and the majority of patients were between ECOG 0 and 1. When looking at the distribution, because this study was open across multiple regions, there was a fair distribution among both the arms between, of course, the majority of enrollment was in North America and Europe, and the numbers were lower in Latin America and Asia Pacific. Other baseline characteristics, the KIT mutation profile. So, the KIT mutation was per the Molecular Pathology Report. That was any time prior to enrollment in the study. When you look at exon 11 only, the majority of the patients fell into that bucket because that is the most predominant GIST type. Then, following that was any exon 9 mutation.

There were patients who had neither reported exon 9 or 11, and some had reported other mutations in KIT, and then some had no mutations either detected or not reported because it was not a requirement prior to entry. Looking at the prior treatment history, imatinib intolerance, as I had mentioned, is fairly rare but was balanced across the two arms. Prior radiotherapy, now radiotherapy is not used often, but we use it sometimes for localized treatment for, you know, if they had focal progression on imatinib, they might have received this, but fairly low numbers. Prior anti-cancer surgery, I think the majority of patients might have had this for their initial presentation or after response to imatinib, but they did have progression at the time of entry. Moving on to slide 10, which is the most exciting slide.

It shows that the combination of bezuclastinib and sunitinib extends PFS with a 50% reduction in the risk of progression or death. As you can see from these Kaplan-Meier curves, once the curves separate, which they separate early on, they seem to run parallel and remain separated. The median PFS was 16.5 months for the combination arm, and for sunitinib alone, it was 9.2 months with a hazard ratio of 0.5 and a p-value of less than 0.001. This was the primary endpoint. Moving on to the next slide. This is also very exciting for us investigators. The response rate in the second-line setting for the combination was almost 46% for bezuclastinib and sunitinib, and 26% for sunitinib alone. The difference in the overall response rate, the p-value was less than 0.0001.

Looking at complete response, it was higher in the combination arm with a 6.4% complete response rate for the combination, and 39.2% was a partial response rate. The reason I say this is exciting and important, you know, we have seen, and there is data for treatment with imatinib, when they have focal progression or some residual disease, we do normally take them to surgery or have other means for focal targeted control of focal progression, and those patients derive actually a much longer PFS or a time on imatinib that eventually extends their survival. If we can extend that same high response rate to the second-line setting in patients who have developed resistance, I think it is quite, you know, possible that we will be offering them similar local control measures for focal progression that will allow them to stay on this combination for much longer.

This was not allowed as part of the study; however, in clinical practice, we might see that. Now, moving on to the next slide, it is important, again, you're using a combination, so I think everybody would be wanting to know whether it was well tolerated or not. What we see here is the combination is generally well tolerated, and the safety profile is not very different from sunitinib alone. The incidence of treatment emergent adverse events and treatment-related adverse events was similar between the treatment arms.

You can see here there was slightly numerically higher grade 3 treatment-related adverse events in the combination arm and also the serious adverse events, but when you look at there were no treatment-related deaths in the combination arm, one on the sunitinib alone arm, and reductions of either drug due to the treatment-related adverse events were around 56% for the combination and 44% for sunitinib alone. Treatment-related, you know, drug reductions required for adverse events is not uncommon in our practice of treating patients with GIST. That is acceptable. What is good is that the discontinuation of study treatment due to these adverse events was fairly low on both arms. If you look at the adverse events that lead to discontinuation of either drug in more than one patient, this was mostly neutropenia in 2.9% patients, ALT/AST increased 1.5%, and diarrhea in 1%.

Moving on to the next slide. This is a table that lists all the grade treatment emergent AEs that occurred in more than 20% of patients, and you can see it's fairly balanced between both the arms. The reported frequency was higher than 15% for the combination arm, included ALT/AST increase, taste disorder, and hair color changes. Of that, of course, the ALT/AST increase are the only ones that are at a higher grade. The others are usually low-grade events. What is very interesting is the treatment emergent AEs reported less frequently in the combination arm. There were ones that were less frequent in the combination arm, including palmar-plantar erythrodysesthesia, the PPE, which is also known as hand-foot syndrome, stomatitis, and thrombocytopenia. These are frequently associated with sunitinib alone, and we can see lower rates in the combination.

Hence, the safety profile of bezuclastinib combination is generally consistent with the known safety profile of sunitinib alone, and there were no new risk factors that were identified with the combination. Moving on to slide 14, here we can go a little deeper into the grade 3 or higher TEAEs that occurred in more than 2% of patients. As you can see, they're balanced across the arms. The majority of the grade 3+ TEAEs were reported at a similar rate in both the arms, except for ALT/AST increase and anemia that were reported. Those were the only two that were higher in the combination arm. As you can see, you know, there are some that are higher in the sunitinib alone arm, as discussed previously. There was no increase in the frequency of severe events observed in the combination arm for hypertension, neutropenia, or diarrhea.

The ALT/AST elevations that led to bezuclastinib dose reductions were in 12.7% of the patients, and only 1.5% of patients discontinued. All grade 3 ALT/AST events resolved, and no grade 4 elevations were reported across the study. Again, discontinued, I mean, most of the times when you reduce the dose, we were able to get through the higher grade LFT elevations. I will move on to slide 15, and the next two slides are going to be my patients of mine that demonstrate nicely the efficacy of this combination, and then I'll turn it over to Andy after. This particular patient is a 66-year-old male with metastatic GIST. He was diagnosed back in 2020. He had, I mean, I'd call it he had adjuvant imatinib.

It was a little advanced at presentation, but imatinib worked, and he underwent debulking surgery in 2022 because there were some areas that were still residual. Thereafter surgery, imatinib was reinitiated, but unfortunately, he had disease progression around September/October 2023 with multiple peritoneal nodules. This is the time he was consented onto the PEAK Study. He was otherwise well. He had some obesity, hypertension, anemia at baseline, some elevated ALT, and creatinine at baseline, and he had noted some abdominal distension. He also had long-term leg swelling, some back pain, and GERD, but all were well controlled. He enrolled on the study, and as you can see from this graph, right at the first restaging at cycle 3, he was noted to have a partial response, which is very exciting.

The images here, of course, are only showing the two nodules that you see there, but he did have multiple nodules in the abdominal cavity. At cycle 9, which is somewhere around April of 2024, he achieved a complete response, and that complete response continues till cycle 26. He actually was on both full doses for quite some time, and sunitinib was reduced to 25 mg, I think, only recently. Moving on to the next slide. This is a 69-year-old gentleman who was diagnosed with GIST back in 2015. He did have some progression, had surgery in 2021. The imatinib dose was increased thereafter, but then he continued to progress and was enrolled in the PEAK Study around end of 2022.

This gentleman had a partial response achieved at cycle 5, but the reduction in tumor was noted right at the first restaging, and that partial response has continued slowly to increase, and this gentleman is now in cycle 36. He did have a dose reduction for sunitinib down to 25 mg as well, but has continued on the 600 mg dose of bezuclastinib. He did have a dose interruption because of grade 3 anemia neutropenia at one point, but after the dose reduction of sunitinib, he has continued. As you can see, the treatment-related adverse events with the maximum grade reported are also on the slide, but again, nothing unusual that we do not encounter with sunitinib alone. I think with that, I will pass it on back to Andy, and I will be available for questions thereafter. Th ank you very much.

Andrew Robbins
President and CEO, Cogent Biosciences

Excellent, excellent. Thank you, Dr. Somaiah, for your great review of our data, including maybe most importantly, your own experience treating patients with the bezuclastinib combination. It's really just amazing to see patients responding so dramatically, and that with this combination, we may have to start measuring patient duration in years instead of months. Now turning to slide 17, I'm going to pause here and emphasize a few points that Dr. Somaiah covered in her presentation.

First, the clinical activity of the bezuclastinib combination outperformed even our loftiest expectations for this trial: 16.5 months of progression-free survival, including a 50% reduction in the risk of progression or death compared to the current standard of care, a 46% objective response rate with 13 patients on the combination achieving a complete response with no evidence of original target lesions, a safety profile across 400+ patients, which uncovered no unique safety risks of adding bezuclastinib to sunitinib, and for some known sunitinib-related adverse events, including, as Dr. Somaiah walked through, PPE, stomatitis, and thrombocytopenia, evidence that the combination treatment may even show signs of reduced frequency and severity of these adverse events.

Second, as we continue to review and analyze these amazing results, it's important to note that 73 of the original 204 patients originally randomized to the bezu combination arm remain on combination therapy as of the data cut. When we project their treatment course, we estimate that the mean treatment duration for patients on bezu combination is expected to exceed 19 months. The clinical benefit and durability of this novel combination continues to impress. Third, as we look forward, the Cogent team is already working diligently to put together a new drug application for bezuclastinib and GIST, with plans to complete that submission in the first half of 2026. If granted priority review, bezuclastinib could be approved for GIST patients as early as the second half of 2026.

In the meantime, Cogent is committed to providing access for the bezuclastinib combination for GIST patients in urgent need as part of our already active no-cost bezuclastinib expanded access program. There are already several expert GIST physicians around the country, including Dr. Somaiah herself, who are participating in this program. Additional information about eligibility can be found on the bezuclastinib patient assistant website. Now, on slide 19, I'd like to remind everyone that we are still just crafting the beginning of the bezuclastinib story. We are weeks away from the results of our third pivotal study, the APEX trial, in patients with advanced systemic mastocytosis.

We plan to share those results in December and hope to demonstrate that potent inhibition of the KIT D816V driver mutation without off-target kinase inhibition and without CNS penetration can lead to robust clinical responses while sparing side effects that are associated with the current standard of care, including frequent edema, cognitive impairment, frequent high-grade hematologic toxicity, and a demonstrated risk of intracranial bleeding. Separate from APEX, we are also on track to submit our first bezuclastinib new drug application in December based on results from the SUMMIT trial in non-advanced systemic mastocytosis patients. We're excited to have two oral presentations at ASH, during which full results from the SUMMIT trial will be presented, as well as the opportunity for Cogent to describe for the first time our novel potent selective JAK2 V617F inhibitor, which will also be shared at ASH. Certainly a busy finish to 2025 for Cogent.

Finally, on slide 20, I would like to take a look at the big picture as it relates to bezuclastinib. Five years ago, we acquired this product and formed Cogent around the idea that bezuclastinib's molecular profile, a potent and exceptionally selective KIT-mutant inhibitor that did not cross the blood-brain barrier, was ideal to develop and position as the best option for patients with both systemic mastocytosis and GIST. Now, with the results of the SUMMIT and PEAK trials, this vision is coming into focus. The global opportunity for these indications is north of $7.5 billion annually, and with very limited competition, Cogent is poised to transition into a rapid-growth commercial stage company in 2026. With a strong patent protection plan through 2043, we are confident and excited at the opportunity in front of us, and we will continue our focus on high-quality, urgent execution against our goals.

Before I open up the call for questions, I'd like to do a few things. I'd like to recognize the amazing team of Cogent professionals that we have assembled over the past five years who have worked so hard on behalf of patients to put us in this amazing position today. I'd also like to congratulate the PEAK investigators around the world, including Dr. Somaiah, who has graciously volunteered to join us today for their help conducting the PEAK Phase III trial that has delivered an exceptional result for GIST patients. Finally, and probably most importantly, to the GIST patients and their families who trusted in Cogent in the PEAK study, you did it. You are amazing, and we are forever grateful for your courage and bravery. Operator, we are now ready to open up the line for questions.

Operator

To ask a question, please press star one one on your telephone and wait for your name to be announced. To withdraw your question, please press star one one again. Please stand by while we compile the Q&A roster. Our first question comes from Anupam Rama with JP Morgan. Your line is open.

Anupam Rama
Analyst, JPMorgan

Hey, guys. Thanks so much for taking the question, and congrats on the data. Not really sure what to ask, even given this mic drop, but I'll ask one to the KOL here, which is, how do you think about incorporating this combination into your treatment paradigm, given everything you know today, and would you consider using it in maybe even more refractory patients, like third or fourth line, given the unmet need? And then one for the company, just you mentioned the EAP program.

Can you give us a sense of what demand has been like here in the early innings and where you think that could go? Thanks so much.

Andrew Robbins
President and CEO, Cogent Biosciences

Great, Anupam. Thanks for the question, and I'll take the second one first, and then I will ask Dr. Somaiah to opine on how she thinks she's going to use the combination. With regards to the EAP, we opened that, I think, this summer officially, and we have several, several patients who have already taken advantage of the opportunity to get the combination. To be fair, until about an hour and a half ago, those patients were signing up based on, I think, the advice of the investigators who already believe the trial would be successful.

I think, based on our announcement this morning, we expect many, many more patients might be interested in trying to figure out how to get access to this combination based on these results. We've seen very good early demand for the combination. I would imagine we're in a different conversation now with the results of the PEAK trial that we've shown this morning. Dr. Somaiah, do you want to opine on maybe how you think about using this combination? I'll expand on Anupam's question, certainly in the second line, but across the treatment landscape for GIST patients for later lines, and then even potentially, if you want to comment on, can you imagine using this in any first-line patients?

Neeta Somaiah
Department Chair of Sarcoma Medical Oncology, MD Anderson Cancer Center

Okay, I'll take all those questions.

Firstly, to follow up on your EAP, we have that open, and we were allowed from our institution initially only 10 patients, and we enrolled that so far, so we're going back to ask for increasing the enrollment to at least 30 at our site, and we are enrolling not only second line, but later lines as well, bringing to the point that, where do I foresee this? Firstly, once regulatory approval is obtained, I think this will become the preferred standard second-line treatment option for patients who are progressing on imatinib. There are still ongoing clinical trials in the second-line setting, and I think they will continue to enroll as we learn more about the GIST mutation and treatment landscape, but I don't see any reason why this would not be adopted as the standard second-line option after approval.

To the point of what beyond second line, I do think this combination is very effective even beyond second line. I mean, I know we will hopefully later see data on the crossover part of this study. I do think it works, and we have data from the initial part one of the PEAK study that shows activity in patients, and those patients were not second line alone. A lot of my patients were on that part of the study as well, who really benefited beyond second line.

I think it is really important to look at that population, and I hope with the expanded access program, you'll be able to generate more data in the later lines setting so that patients will be allowed to get on this combination even after the second line, because we have a lot of patients who are past second-line treatment right now who should get access to this combination.

Anupam Rama
Analyst, JPMorgan

Thanks so much for taking our question. Congrats again.

Operator

Thank you. Our next question comes from Michael Schmidt with Guggenheim. Your line is open.

Paul Jeng
Analyst, Guggenheim

It's Paul from Michael. Thanks for taking our question, and congrats on the terrific results today. My first question is on safety.

Could you provide any additional details on how the bezu-related adverse events versus suit-related adverse events were adjudicated in a combo, and how that informed dose modifications for one versus the other on the study? My second question is, you mentioned the 19-month duration of treatment, which is longer than the median PFS that you're seeing. How are you projecting that number, and is there a particular subset of patients who are seeing more outsized benefits who are driving some of that duration? How confident are you that that will translate to the real-world setting? Thank you.

Andrew Robbins
President and CEO, Cogent Biosciences

Great. Thanks, Paul, and I'll do my best to take these, and then I'll ask Dr. Somaiah if she has anything to add.

With regards to during the conduct of the trial, how investigators determined dose modification for the combination drugs, the final answer is it was left up to the investigator locally with the patient to determine the right course of action and right care. Of course, Cogent did our best to educate. Dr. Somaiah does not need our help, but across the world, physicians about what you might do if you see a specific adverse event or not. I think we are now in a very different position based on the results of the trial, so I will give you an example. You can see in the slides that Dr. Somaiah walked through that one of the most frequent, albeit still at only 2% of patients, reasons for discontinuation of the combination bezuclastinib-sunitinib was for neutropenia.

If you move and look at the rates of neutropenia between the single-agent sunitinib arm and the combination arm, you'll see that the rate of all grade and grade 3 is identical between sunitinib and sunitinib-bezuclastinib, which I think speaks to going forward in the future, maybe less likelihood of discontinuing bezuclastinib in a patient that presents with neutropenia. Potentially, based on the results that we've shown in a very robust Phase III setting, maybe more likelihood to first reduce or discontinue sunitinib and maybe leave bezuclastinib in place to see if that's a possibility. Hopefully, that's helpful. Number two, with regards to the mean duration of treatment of 19 months, I think when you see oncology products that have long median progression-free survival, you typically see a minority of patients getting very, very, very durable benefits.

Two of the patients were described by Dr. Somaiah today with currently ongoing after two years and after three years. While they're not constrained to the responders, what we do see is that patients that have a response tend to be very durable. What we're doing here is projecting not the median duration of treatment, but the mean, and that percentage of patients, call it 25%, 30%, 35% of patients who get past two years and three years are really driving that utilization of the mean treatment duration, pulling the average, the mean, much further than the median of progression-free survival.

I don't know if Dr. Somaiah, do you want to speak on anything else about how you determined dose modifications for the individual drugs on the trial, and then maybe your thoughts about how that could change now that we have the results of the study?

Neeta Somaiah
Department Chair of Sarcoma Medical Oncology, MD Anderson Cancer Center

Yeah. No, I do hope it does change. So, yeah, when you on study, I think when there is a side effect, it's difficult to when you're assigning and there's patients on both drugs, I can imagine why people had assigned the relationship to both drugs in most places. But when you look at the side effect profile, it is clear. So, majority of the times, I have not had to actually discontinue drug. I was just able to reduce the sunitinib dose down to 12.5 in some of the patients that had cytopenias, which was one of the reasons of needing to hold drug.

We were able to continue patients with that lower dose sunitinib and bezuclastinib. As you saw, of course, I think the liver function increased. That is one, if it is high, might need reduction of both drugs because you do not know which one is the major driver. For the majority of the other side effects, I believe now in clinical practice, people will make an attempt to lower sunitinib first before lowering bezuclastinib. Also, I think, and the good news is we did not see a drop in efficacy, and that I think points to perhaps sunitinib, even a lower dose, being effective against the exon 13 resistance mutations and not affecting the efficacy much. We will see more once more data in the secondary mutation space comes out, but I think we should not have as many both drug dose decreases or discontinuations in clinical practice moving forward.

Paul Jeng
Analyst, Guggenheim

Great. Very helpful. Thank you. Congrats again.

Operator

Thank you. Our next question comes from Andrew Berens with Leerink Partners. Your line is open.

Amanda Acosta-Ruiz
Analyst, Leerink Partners

Hi, everyone. This is Amanda on for Andy. Congrats on the data, and thanks for taking our question. We'd like to get more information on the breakdown of patients that have the KIT exon 13, 14 mutations versus the 17, 18, or is there any color that you can provide on these segments of patients? Thank you.

Andrew Robbins
President and CEO, Cogent Biosciences

Yeah, it's a great question, and the simple answer is there's just a ton of emerging data from this trial that we're going to continue analyzing and be able to bring forward at a medical meeting. One of the things we're doing on purpose is trying to preserve a lot of those results so that Dr. Somaiah and her colleagues get a chance to stand in a big room with a lot of people at a medical meeting in the future.

What I can tell you, though, is we have looked preliminarily at it, and maybe most importantly, when we look at the baseline characteristics and the secondary resistance mutation genotypes, the population of the PEAK trial looks highly analogous to the population of the INTRIGUE study. I think from a frequency of 13, 14, 17, 18, the mix across those two, we're going to be looking at a dataset that we can do a nice job comparing, and we will have robust sample sizes from each of those genotype subgroups.

At a very, very high level, I think what's potentially most exciting about the future is the combination, as Dr. Somaiah nicely walked through on that mutational coverage grid slide earlier in the presentation, that the science of this combination is that when you give patients bezu and suit-combo, it should help all of the genotype subgroups. And I can tell you broadly, that's what the finding is going to look like. We're not constrained to an outsized effect in a small group of one genotype. This combination is really going to provide benefit across all of the genotype subgroups.

Amanda Acosta-Ruiz
Analyst, Leerink Partners

Got it. Thanks so much.

Operator

Thank you. Our next question comes from Sam Slutsky with LifeSci Capital. Your line is open.

Sam Slutsky
Analyst, LifeSci Capital

Hey, thanks for taking the questions, and congrats on the great data. Just two for me. I guess, first, any thoughts on eventually going into a front-line study, just given how strong these data are in the second line?

On safety, obviously, adverse events like PPE, thrombocytopenia, stomatitis look better with the combo than with sunitinib alone. How much of that do you think is associated with the DDI, where you do lower sunitinib exposure a little? For Dr. Somaiah, I guess, how appealing is it to lower these specific AEs with sunitinib such as PPE, thrombocytopenia, and stomatitis?

Andrew Robbins
President and CEO, Cogent Biosciences

Great. Sam, good morning. Thanks for the questions. Again, I'll kind of dive into that first one, but Dr. Somaiah, I'm curious to hear your thoughts on essentially all these questions. What I can tell you is, obviously, imatinib is a very, very effective first-line therapy for GIST patients. I think we all have heard the story of Gleevec. It's probably one of the most impressive drugs ever developed in the drug industry from 25 years ago.

We have already had conversations, not since this data, but even leading into this data with investigators on both sides of the ocean interested in exploring the utility of bezuclastinib as a potential combination drug in the first-line setting. I think what we can sign up for is generating data in potentially smaller exploratory groups of first-line patients doing something like bezuclastinib combinations in a handful of first-line patients to see what the activity looks like. I think there's really interesting scientific questions around, would you use a bezuclastinib combination in exon 9 primary mutation patients where maybe imatinib is not as effective as it could be in exon 11? Look, we're just digesting these data, and those are really going to be fun conversations to have with the GIST community moving forward.

On your second question around what's going on and how does adding bezuclastinib make some of these side effects look improved, which is obviously exciting for patients, I do think that there is a nice scientific hypothesis about that CYP3A4 drug-drug interaction that we reported a couple of years ago where, in combination with bezuclastinib, sunitinib exposure gets, I'm going to call it, smoothed out a little bit. I think Dr. Somaiah has already talked about this during her comments. We, of course, always love the idea of some of these tolerability challenges for patients like PPE and stomatitis specifically that patients obviously feel getting less frequent or maybe less severe. Maybe I'll turn it to Dr. Somaiah for her thoughts about what the dynamics might be there and whether that's clinically relevant in her practice.

Neeta Somaiah
Department Chair of Sarcoma Medical Oncology, MD Anderson Cancer Center

Perfect. Yeah. I'll take the DDI, the side effect question first, and then I'll move on to the first-line setting. With regards, I think with sunitinib and just these TKIs that follow imatinib, the palmar-plantar erythrodysesthesia, the PPEs, is one of the most problematic quality-of-life-affecting side effects. Hypertension is also a problem, but people do not feel it unless it goes really high. Liver function abnormalities, it is standard practice that we monitor these every two weeks initially because that is when we see it, but patients do not tend to feel anything. Reduction in the PPE actually is quite a good effect of the combination that allows patients to stay on it long-term. Even with sunitinib, as I said, most often we are able to control that side effect by dose reduction.

Of course, with the combination, it reduces the growth of these tumors, so it allows patients to stay on the combination for much longer, even with the lower dose of sunitinib. I think that is a definite advantage, and I think the DDI reported is probably what is driving that. With regards to the first-line setting, I do think this combination in the front line might be a bit challenging just because imatinib works very well. Looking at sunitinib plus bezuclastinib front line would only be possible if the patient had really bulky disease and already known secondary mutations that we detected maybe perhaps in a liquid biopsy. Otherwise, I think imatinib will still be front line.

Now, bezuclastinib has the benefit of being similar to imatinib in the sense it does not affect wound healing, and patients can still go to surgery even if they're on the bezuclastinib. Combining bezuclastinib in the front line setting with imatinib is a thought, and I think probably will take a little bit more of patient selection because there are patients who have primary exon 17 mutations or certain combinations of mutations upfront. If we are able to do that without increasing toxicity too much, I think that is definitely reasonable.

Operator

Thank you. Our next question comes from Chris Raymond with Raymond James. Your line is open.

Chris Raymond
Analyst, Raymond James

Hey, thanks, and congrats from us as well on this really groundbreaking data. Maybe first for Dr. Somaiah, just a question for those patients that you have that are maybe just starting sunitinib that haven't progressed yet.

Just with this benign and maybe even improved safety profile of this combo, would there be a scenario where you would add bezu for those patients already initiated with sunitinib monotherapy? Maybe for the company and for Dr. Somaiah. I'm hearing you guys talk a lot about a potential dose reduction regimen here with sunitinib. This sounds a little bit like maybe there would be a need here to develop some kind of formal maintenance regimen. Any sort of plan there? Thank you. Congrats again.

Andrew Robbins
President and CEO, Cogent Biosciences

Thanks, Chris, for your question. Again, to your second question, I guess my quick answer is we are literally a couple of days into analyzing this data, and there are, based on the results, like 100 questions and hypotheses we have about how can we move this forward as a standard of care, what can we do to help the GIST community, how can we partner with folks like Dr. Somaiah to do additional studies to really dial in the exact way we want to use bezuclastinib combo in these patients going forward. I think yes to all your thoughts. I'll ask Dr. Somaiah to opine specifically on your question.

With regards to the addition of bezuclastinib to sunitinib, one thing that Dr. Somaiah has already referenced, and we don't have these data yet, but we will bring them to light, is part of the trial included a crossover where you add bezuclastinib for patients who have formally progressed on sunitinib, and we're going to get those results to see the performance of those patients. I think your question might be, why would you wait until somebody progresses who's currently receiving sunitinib? Why not just add the bezuclastinib right away, both today on EAP and then in the future in a commercial setting for sort of that installed base of patients? I personally think that's a really good idea, but maybe we'll turn it to Dr. Somaiah to see what she might do in her practice.

Neeta Somaiah
Department Chair of Sarcoma Medical Oncology, MD Anderson Cancer Center

Yeah. It's a good question, and I think we need, as the data evolves, I think that answer will get clearer. What I will do currently for my patients, it would be very patient-dependent because it is also dependent on the bulk of disease. We get a sense of how long these patients are going to potentially stay on this monotherapy. As I said, I had a lot of patients that crossed over and derived benefit after crossover as well. We have to look at the data to see. I think the OS, because the patients did very well, will take a long time to read out. We will have to look at the overall benefit of that sequential. I mean, if the patient is on sunitinib and is tolerating it well and responding and does not have very bulky disease, I might just continue them on it.

Whereas if it is easy and it's available and there is access and they have bulky disease, it might make sense to add the combination or add them back on bezuclastinib right away. The point is when they're on sunitinib, they don't stay on it long enough. Eventually, we will have to add the bezuclastinib. What I'm getting at is I don't know if early addition has a significant benefit or not. I think, as I said, looking at individual patients, if it's a patient that I want a better response so I can take them to surgery, those are the patients I would want to add on the second drug right away. As we see with no worsening of side effects, I think there might be a lot of investigators who would do that or a lot of treating physicians who would do that.

Chris Raymond
Analyst, Raymond James

Thank you.

Andrew Robbins
President and CEO, Cogent Biosciences

Okay. I think we're going to have time for one more question. Before we get to it, I just want to recognize Dr. Somaiah for her willingness to be with us very early to describe this very exciting data. It's incredibly helpful to have somebody who treats patients and is a deep expert to help us put this data in context. Thanks, Dr. Somaiah. Now, I think we'll take one more question and then wrap the call for this morning.

Operator

Thank you. Our final question comes from Clara Dong with Jefferies. Your line is open.

Clara Dong
Analyst, Jefferies

Hi. Good morning. Thanks for taking our questions and congrats from that. It's really remarkable data. One for Dr. Somaiah. How do you expect the main treatment duration of over 19 months to translate into real-world practice from your perspective?

Maybe where factors like dose modifications and patient adherence also come into play. And then also a question for Andy. You referenced a $4 billion market opportunity globally for GIST. Maybe could you walk us through the key assumptions behind that figure, like patient population sizing and pricing, etc.?

Andrew Robbins
President and CEO, Cogent Biosciences

Thank you. Sure. Sure. So, thanks for the question. I'll take the first one or the second question first, and then maybe we can hand it to Dr. Somaiah to talk about her experience treating patients and durability. When we talk about the global opportunity here, we're really kind of focused on the United States and Western Europe. I think outside of those territories, of course, there's also potential upside from a commercial potential over time. If we look at just the epidemiology, and Dr. Somaiah already referenced this in her comments, each year there's about 6,000 new patients diagnosed with GIST.

I think there's about 85% of those with confirmed KIT mutations. And then each year, about 60% of patients develop resistance or intolerance to imatinib from the first-line setting. That gives you, on an annual basis, around 3,000 patients as sort of classic second-line patients on an annual basis. The current or the most recent drug approved in GIST is ripretinib or QINLOCK, which is priced at about $43,000 a month WAC pricing. Based on the estimates from the Phase III PEAK trial of around a 19-month average treatment duration, you can multiply those up to get to that global number of about a $4 billion market with essentially no competition. As we know, sunitinib was approved now about 20 years ago. It's a generic drug. There's nobody promoting it.

Quite honestly, we need sunitinib as part of our combination for the scientific and biologic reasons that Dr. Somaiah has gone through. Bezuclastinib is an excellent inhibitor of activation loop domain mutations and some of the primary mutations, but it does need an ATP domain mutation partner, of which sunitinib is the best one available today. Looking to launch this drug in late 2026, I think there is an excellent opportunity for Cogent partnering with investigators around the world to really rapidly penetrate this market with bezuclastinib combination as the emerging standard of care. Maybe I will hand it over to Dr. Somaiah for her opinions about durability of the combination. Again, I think we walked through how we've calculated this 19-month mean treatment duration for patients on the study.

We do think that there is going to be a very large fraction of patients who have these very, very long durable responses, like the patients that Dr. Somaiah used to exemplify her experience treating in the case studies. Maybe Dr. Somaiah, if you want to add anything to that.

Neeta Somaiah
Department Chair of Sarcoma Medical Oncology, MD Anderson Cancer Center

Yeah. No. Again, of course, there are some patients who eventually will progress and will need to go on, but those patients who are responding and continue to respond, the response seems quite durable. The other interesting thing in my, there were some patients who came off due to focal progression. As I said, the study did not allow us to do focal treatment or maybe liver-directed therapy or resection of the progressing lesion and continue them on it because when those patients went on to the next lines of therapy, the progression was much faster.

Patients really wanted to get access and go back to the combination again for at least more sustained control. They were actually doing better on the combination. I'm just saying that from my personal experience. It will be great to have this option available, and I think patients will stay on it. As I said before, when you have a great response and a deep response, we all investigators will figure out how to keep patients on it longer. If we see some focal progression, how to treat it and continue therapy. With regards to compliance, of course, patients on clinical trial are a motivated bunch, so their compliance is always higher.

However, I will say that patients, once they have progressed on imatinib, I think they do come to a realization because if they have not been compliant with their imatinib and they had progression, I have this talk with my patients all the time. It is like, "Come to grips with what is reality." When they are struggling with, "Why do I have to take this all the time and this?" and when they are actually progressing and they are dealing with what comes next, their worldview and their ability to stay on drug changes. Compliance second line and beyond actually is better than in the front line. Of course, it will be very important to ensure access to medications so that patients can continue getting access without a big cost burden, and all of that will also play into their ability to stay on the medication long term.

Clara Dong
Analyst, Jefferies

Thank you very much.

Operator

Thank you. This concludes today's conference call. Thanks for participating. You may now disconnect.

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